Study of the dynamics of relative expression of the EGR1 gene in rainbow trout in different tissues
https://doi.org/10.32634/0869-8155-2024-386-9-77-81
Abstract
The purpose of this study was to study the dynamics of the comparative level of expression of the EGR1 gene in the tissues of rainbow trout at different ages. The EGR1 gene encodes a transcription factor that influences the transcription of a large number of genes from both the 5-bar and 3-bar ends of genes. A random sample of fish aged 6, 12 and 18 months was taken for the study. To assess the expression level of the EGR1 gene, located on 14 chromosomes, a housekeeping gene was taken: G6PD. A comparative analysis of the expression level of the EGR1 gene in rectal tissues revealed a significant change in different age periods of rainbow trout. Expression in the tissues of the rectum at the age of 6 months was maximal, and at the age of 12 months it was minimal, but no significant differences were found (p = 0.2648). As a result of the analysis of changes in the level of relative expression of the EGR1 gene in the heart tissues of rainbow trout at different ages, it was found that in the group of fish aged 6 months, the expression level was maximum at the stage of 12 and 18 months (р < 0.01). As a result of the study, a correlation between the size and weight parameters of rainbow trout and the level of gene expression in different eras and in different countries was established. Expression dynamics at different ages in rainbow trout were also determined.
About the Authors
Yu. S. ShcherbackovRussian Federation
Yuri Sergeevich Shcherbackov, Candidate of Biological Sciences, Junior Researcher
55А Moscow highway, Pushkin, St. Petersburg, 196601
O. A. Nikolaeva
Russian Federation
Olga Anatolyevna Nikolaeva, Junior Reseacher
55А Moscow highway, Pushkin, St. Petersburg, 196601
V. I. Tyshchenko
Russian Federation
Valentina Ivanovna Tyshchenko, Candidate of Biological Sciences, Senior Researcher
55А Moscow highway, Pushkin, St. Petersburg, 196601
References
1. Makoedov A.N., Matishov G.G., Ponomareva E.N. World Trends in the Use of Aquatic Biological Resources. Vestnik Rossijskoj akademii nauk. 2023; 93(2): 179–190 (in Russian). https://doi.org/10.31857/S086958732301005X
2. Truba M.A. Development of freshwater aquaculture in Russia: state and prospects of the industry. Economics of Agriculture of Russia. 2022; (10): 66–70 (in Russian). https://doi.org/10.32651/2210-66
3. Zhang L., Cho J., Ptak D., Leung Y.F. The Role of egr1 in Early Zebrafish Retinogenesis. PLoS ONE. 2013; 8(2): e56108. https://doi.org/10.1371/journal.pone.0056108
4. Duclot F., Kabbaj M. The Role of Early Growth Response 1 (EGR1) in Brain Plasticity and Neuropsychiatric Disorders. Frontiers in Behavioral Neuroscience. 2017; 11: 35. https://doi.org/10.3389/fnbeh.2017.00035
5. Arora S. et al. Egr1 regulates the coordinated expression of numerous EGF receptor target genes as identified by ChIP-on-chip. Genome Biology. 2008; 9: R166. https://doi.org/10.1186/gb-2008-9-11-r166
6. Deguchi T., Fujimori. K.E., Kawasaki T., Xianghai L., Yuba S. Expression patterns of the Egr1 and Egr3 genes during medaka embryonic development. Gene Expression Patterns. 2009; 9(4): 209–214. https://doi.org/10.1016/j.gep.2008.12.004
7. Drummond I.A., Rohwer-Nutter P., Sukhatme V.P. The Zebrafish egr1 Gene Encodes a Highly Conserved, Zinc-Finger Transcriptional Regulator. DNA and Cell Biology. 1994; 13(10): 1047–1055. https://doi.org/10.1089/dna.1994.13.1047
8. Ma Z.-G. et al. IRX2 regulates angiotensin II-induced cardiac fibrosis by transcriptionally activating EGR1 in male mice. Nature Communications. 2023; 14: 4967. https://doi.org/10.1038/s41467-023-40639-6
9. Nikipelov V.I., Bardukov N.V., Kharzinova V.R., Grozesku Yu.N., Zinovieva N.A. Characterization of microsatellite loci and their polymorphism in the aquaculture sterlet (Acipencer ruthenus). Genetics and breeding of animals. 2023; (2): 5–13 (in Russian). https://doi.org/10.31043/2410-2733-2023-2-5-13
10. Tallafuss A. et al. Egr1 Is Necessary for Forebrain Dopaminergic Signaling during Social Behavior. eNeuro. 2022; 9(2): 0035-22.2022. https://doi.org/10.1523/ENEURO.0035-22.2022 11. Zueva M.S., Miroshnikova E.P., Arinzhanov A.E., Kilyakova Yu.V. Modern research on the study of the intestinal microbiome of fish. Animal Husbandry and Fodder Production. 2023; 106(2): 198–213 (in Russian). https://doi.org/10.33284/2658-3135-106-2-198.
11. Kress S., Wullimann M.F. Correlated basal expression of immediate early gene egr1 and tyrosine hydroxylase in zebrafish brain and downregulation in olfactory bulb after transitory olfactory deprivation. Journal of Chemical Neuroanatomy. 2012; 46(1–2): 51–66. https://doi.org/10.1016/j.jchemneu.2012.09.002
12. Livak K.J., Schmittgen T.D. Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔC T Method. Methods. 2001; 25(4): 402–408. https://doi.org/10.1006/meth.2001.1262
Review
For citations:
Shcherbackov Yu.S., Nikolaeva O.A., Tyshchenko V.I. Study of the dynamics of relative expression of the EGR1 gene in rainbow trout in different tissues. Agrarian science. 2024;1(9):77-81. (In Russ.) https://doi.org/10.32634/0869-8155-2024-386-9-77-81